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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927188.1_cds_XP_016475085.1_67047
CDS Infomation

[gene=LOC107796788] [db_xref=GeneID:107796788] [protein=serine/threonine-protein kinase AFC1-like] [protein_id=XP_016475085.1] [location=complement(join(61456..61614,62160..62265,62352..62449,65068..65132,65211..65367,73250..73341,73557..73671,73779..73827,73911..74064,74702..74728,75892..76063,77385..77507))] [gbkey=CDS]
Sequence

ATGGAAACCCAACCATTAATGGAATTTCCTCGGAGAAATATAGATAAGCGACCTCGAAAA
CGGCCTCGTTTGGCATGGGACATAGGGCCTCCAATTCAGCCTCCAATTCCACCAATTCCC
AAGGTTCTTCCAACAATATACTGTGGGCAAGAGTTTGGGAACGGAGCATTGCTGAACTAT
GCTAATTCTTCAATATATTACAAGGGGATCCCTCATAATGGATCTCCTCCTCGGAGACCA
GATGATAAAGATGGCCACTATGTTTTTGCGATTGGGGAGAACTTAACTCTTCGCTACAGG
ATACTCAGCAAAATGGGGGAAGGGACTTTTGGACAAGTCCTTGAATGCCTAGACAATGAA
ACAAAGGAACTTGTGGCAATTAAAGTTGTTCGTTCAATACATAAATACCGAGAAGCGGCA
ATGATTGAAATAGATGTCCTACAGAAACTTGCCAGGCATGATCTTGGTGGCAAACGTTGT
GTGCAAATAAGGAATTGGTTTGACTATCGTAATCATATATGTATTGTTTTTGAGAAGCTT
GGTCCAAGCTTATACGATTTTCTTCGCAAAAACAGCTATCGTTCATTTCCCATTGATCTT
GTCCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGATCTGCGACTG
ATTCACACTGATCTGAAGCCAGAAAATATTCTCCTTGTTTCGTCAGAGTATCTTAAAGTT
CCAGATTACAAGTTCCTGCTGCGACCTGCAAAAGATGGTTCCTACTTCAAGAATGTACCA
AAGTCAAGTGCTATTAAGCTCATTGACTTCGGCAGTACTACGTTTGAACATCAGGATCAT
ACTTATGTGGTGTCTACACGTCATTACCGTGCTCCAGAGGTTATTTTAGGTCTTGGATGG
AACTATCCCTGTGATATGTGGAGTATAGGTTGCATACTTGTTGAGCTTTGCTCTGGTGAG
GCTCTTTTTCAAACACATGAGAACTTAGAACATCTCGCAATGATGGAAAAGGTGCTAGGG
CCTCTTCCTCAGCACATGTCTGTGAGAGCTGACCGCCGTGCTGAGAAATATTTTAGAAGG
GGTGCAAGGTTGGATTGGCCAGAGCGTGCAACTTCAAGTGAAAGTATGAGGGCTGTCTGG
AAATTGCCTCGTCTCCAGAACCTAATAATGCAGCATGTGGACCACTCTGCTGGAGATCTC
ATTGATCTTCTGCAAGGGCTGCTTTGTTATGACCCAACAGAACGGCTGAAAGCTAGAGAA
GCATTACGGCACCCCTTCTTCACTAGAGACCTGAGAAGGTGTGGTTATCCAATGTAA

Peptide Sequence

PEP ID

XP_016475085.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase AFC1-like [Nicotiana tabacum]
Sequence

METQPLMEFPRRNIDKRPRKRPRLAWDIGPPIQPPIPPIPKVLPTIYCGQEFGNGALLNY
ANSSIYYKGIPHNGSPPRRPDDKDGHYVFAIGENLTLRYRILSKMGEGTFGQVLECLDNE
TKELVAIKVVRSIHKYREAAMIEIDVLQKLARHDLGGKRCVQIRNWFDYRNHICIVFEKL
GPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLRLIHTDLKPENILLVSSEYLKV
PDYKFLLRPAKDGSYFKNVPKSSAIKLIDFGSTTFEHQDHTYVVSTRHYRAPEVILGLGW
NYPCDMWSIGCILVELCSGEALFQTHENLEHLAMMEKVLGPLPQHMSVRADRRAEKYFRR
GARLDWPERATSSESMRAVWKLPRLQNLIMQHVDHSAGDLIDLLQGLLCYDPTERLKARE
ALRHPFFTRDLRRCGYPM

Transcript Sequence

Gene sequence data has not been registered.